PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro07_G21107 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | ERF | ||||||||
Protein Properties | Length: 354aa MW: 39853 Da PI: 5.2194 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.9 | 7.8e-16 | 126 | 174 | 1 | 53 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 s ++GVr++k g+W+AeIrdp+++ r +lg++ taeeA a++ +r k+ Ro07_G21107 126 SPFRGVRRRK-YGKWAAEIRDPVKG---GRLWLGTYATAEEASHAYETMRSKF 174 679****999.8*********7654...7******************999875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 354 aa Download sequence |
MPKPLLNQRN NKSNKSSERQ KFRADNEDTK VFTRKVRIMF NDPDATDSSS SSEDEKMETA 60 DYENKKSSKS KRFVREVIHS FFTHSGRAVS CEAPPQTKRM MMGVSVSTAN KTETRTSSGR 120 KQSSSSPFRG VRRRKYGKWA AEIRDPVKGG RLWLGTYATA EEASHAYETM RSKFDEILRE 180 TTTTICSGKN NNDDESNSNH EHLFLLRKAT SLSLEAAAVD SDGRGLLSQQ GIPVSVLDLG 240 ITDSNSIQNG KSADHSDKET IGTENVGQLQ IPLDSSFLNE VFESLYNIEQ QKQQHVFNFV 300 PDEEVNEPIS SLEELGKYFD RIYCSIDDLK ISGFDDQPTN LPDCDFDDIP TINE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.1 | 5e-18 | ERF family protein |