PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro07_G20433
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family NAC
Protein Properties Length: 748aa    MW: 84978.9 Da    PI: 4.535
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro07_G20433genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM75.81e-231596589
          NAM  5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89
                 ++F+Pt+++lv ++Lk k++g++ ++   i+e+d+yk+ePwdLp  +v++ ++ew+fF+++++ky tg+r+nr+t++gyWk+t ++
  Ro07_G20433 15 MKFQPTEQQLV-NFLKMKMDGRDSQF---IPEIDLYKYEPWDLPaLSVAKCSEEWFFFTQNSNKYITGNRSNRQTENGYWKKTCRE 96
                 79*********.9*********9666...***************657777789*****************************9875 PP

2NAM912.1e-281382431128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                  lp Gf+F+P++e l+++yL++k++         ++e+d++++eP++Lp    +++kew+fF +++         +r+t++gyWk tg+ +++++++++
  Ro07_G20433 138 LPEGFKFQPSEERLLNHYLRNKLA---------FPEIDLCRFEPHQLP----ESDKEWFFFNRQR---------RRTTEHGYWKITGNGRKIKASDKS 213
                  699*****************9975.........567899********9....4689*****8754.........57999******************* PP

          NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                   +g  ++++fykgrap+g+kt Wv+hey+l
  Ro07_G20433 214 IIGKMRIMTFYKGRAPDGRKTGWVIHEYSL 243
                  ****************************97 PP

3NAM39.22.2e-12419465249
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49 
                  p G+ FhP+d+ l+++yL+kk eg + ++ ++i+e+d++k+eP+dLp 
  Ro07_G20433 419 PEGVGFHPSDKKLLCHYLAKKNEGMDSQI-TIIPEIDLCKHEPRDLPG 465
                  89************************999.89**************94 PP

Sequence ? help Back to Top
Protein Sequence    Length: 748 aa     Download sequence    
MRIALSTYIN VKEDMKFQPT EQQLVNFLKM KMDGRDSQFI PEIDLYKYEP WDLPALSVAK  60
CSEEWFFFTQ NSNKYITGNR SNRQTENGYW KKTCRELPTN LVLCRIKWNS EGSSHEDSNN  120
SIACFDTEEI EMTATFTLPE GFKFQPSEER LLNHYLRNKL AFPEIDLCRF EPHQLPESDK  180
EWFFFNRQRR RTTEHGYWKI TGNGRKIKAS DKSIIGKMRI MTFYKGRAPD GRKTGWVIHE  240
YSLLPNDNNQ LFDPPEVNLD SLFPPLQPQD YRPILQSPIS TELGNVPHAN VYYSECIKWQ  300
CAFGNDDSYF GHIKRNSSQD HDKPPRMYSE LGDALHNIEC NELQSPLEDN DSSLREFLNT  360
SIADQDYYSS EETAQTPLKD SNPPKSYDGN SGSNQNEHSS KSAATFKVRE MNSSCITIPE  420
GVGFHPSDKK LLCHYLAKKN EGMDSQITII PEIDLCKHEP RDLPGDFVLC RLKNNSGQFD  480
HEPIWDEAEP SSGSCSMIST VENQAAAKGN HDEAEPGIAS DLEIQAASND TLTEAELNLA  540
FTAMIEKLLD DYELENLNSL PPQPQPPPPH PHELPQPQDY HHSALQSPIY QQPGNVSHAT  600
NVGNDESRKR DYPFGDNDPS LTKKNNISTN DDDDELGRNT ASSSENQAAV GIPEGYSQPV  660
ANLGSVFDSF PPINREPRDF SYDNDFIEWD DLPNLVEDIG YPLAYEVSSD RNTEVANGSV  720
KDYSALANEN VKGDLVIIRL LQMVQTSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.15e-28NAC family protein