PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro07_G17024
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family NAC
Protein Properties Length: 603aa    MW: 67379.8 Da    PI: 4.3899
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro07_G17024genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1752.2e-5491361128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                  l+pGfrFhPtdeelv++yLk+kv+gk++++ ++i+ vdiyk+ePwdLp k k+k+++ ewyfFs  dkky +++r+nrat++gyWk+tgkd++v++ +
  Ro07_G17024   9 LAPGFRFHPTDEELVWYYLKRKVAGKSFRF-DAISVVDIYKIEPWDLPgKsKLKSRDMEWYFFSLLDKKYGNSSRTNRATEKGYWKTTGKDRPVCH-N 104
                  579**************************9.99***************6348888999**************************************.9 PP

          NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                  +++vg+kktLvf++grapkg +t+Wvmheyrl
  Ro07_G17024 105 SREVGMKKTLVFHSGRAPKGARTNWVMHEYRL 136
                  99****************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 603 aa     Download sequence    
MGRQSAQSLA PGFRFHPTDE ELVWYYLKRK VAGKSFRFDA ISVVDIYKIE PWDLPGKSKL  60
KSRDMEWYFF SLLDKKYGNS SRTNRATEKG YWKTTGKDRP VCHNSREVGM KKTLVFHSGR  120
APKGARTNWV MHEYRLDNQE LEKAGIIEKD AYVLCRIFQK SGTGPKNGEQ YGAPFLEEEW  180
DEEDEVYGPG EEATAHEVAV SGGPYAEANE FSDGGYVEAL DLDQNLDTGV PESAPRPLNF  240
YHGETSNYVE QSGDFIEDAA MTAVGAGETL EYCEDQKYFD LPEHYEMDAK PVKVEYLTSE  300
YHDNQKFFDL PEYYETDAKA VKDEYYVEPS NNVIPVDVSY SLNDPYLNAT ENPPFGDGQF  360
LETNDLSIPA NPVESNSAGF DMLDEYLTYF DADDDISQYI DFDSCGMMGN ENIVPGQAPV  420
EQKSVTGEIE PLSTGSQHLV EAHDINDASS SKQKPDVTFG SDGKYPFITK ASQMLGSIPA  480
PPAFASEFPP KDAILRLNSE AASSSSVHAG MIRIRDITSS DNRVEWSIGK DGVVNLVFSV  540
QLPQSDVTAA NLVPMGGSVS GKTGSVVMRG WFLFMFFWVL FLSISFKIGS YICAKRNGSQ  600
HFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-141NAC family protein