PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Ro07_G14616 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 245aa MW: 28144.8 Da PI: 8.4163 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 102.6 | 2.3e-32 | 171 | 228 | 1 | 58 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 ldDgy+WrKYGqK+vk+s +prsYYrCt+++C+vkk+ver +ed ++v++tYeg+Hnh Ro07_G14616 171 LDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNH 228 59******************************************************** PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 245 aa Download sequence |
MEGDHQRVVP NYNLHQQVSF TGSTPPAQQA IHHELGFVQF EDHHHHHHHH HQVLSFLAPS 60 LTQQPQPPSS HRHQTAAANS SVTVTTAAAT NTDMGFSHSH NHFTRPSWNN NDQVGTLDPK 120 GVSDENGTGN ASDCSNSWWR SSNSDKSKMK VRRKLREPRF CFQTRSDVDV LDDGYKWRKY 180 GQKVVKNSLH PRSYYRCTHN NCRVKKRVER LSEDCRMVIT TYEGRHNHIP SDDSNSSEHE 240 CFTSF |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 150 | 156 | KVRRKLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G44745.1 | 3e-71 | WRKY family protein |