PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro07_G13245 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | G2-like | ||||||||
Protein Properties | Length: 189aa MW: 21485 Da PI: 9.0292 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 38.6 | 2.4e-12 | 98 | 149 | 5 | 50 |
G2-like 5 rWtpeLHerFveaveqLGG..sekAtPktilelmkv....kgLtlehvkSHL 50 Wt e H+r veav qLGG + kAtPk++l+lm +gLt + HL Ro07_G13245 98 SWTLEHHRRVVEAVIQLGGlsNSKATPKAVLKLMAEedhrQGLTSRMISHHL 149 7******************44469**********752222699999999998 PP | |||||||
2 | Myb_DNA-binding | 22.4 | 2.9e-07 | 98 | 149 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT.....TTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg.....tWktIartmg.....kgRtlkqcksrw 44 +WT e + + v+av qlGg t+k++ + m +g+t ++ +++ Ro07_G13245 98 SWTLEHHRRVVEAVIQLGGLsnskaTPKAVLKLMAeedhrQGLTSRMISHHL 149 7*****************88*****************999999999999997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
MHLRSMATPR MFEWTLEHHK QFLDTFILLG GDYKKVGAFE VLRAELLSLV GCCCTSFFLV 60 NHFMLLEQLQ KKSESLFCNS NKVSLKGLYV APIKLSSSWT LEHHRRVVEA VIQLGGLSNS 120 KATPKAVLKL MAEEDHRQGL TSRMISHHLS ELSRLQKETQ RLISSRPSCV QEVDDRISIY 180 LNTSANALI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06800.2 | 3e-07 | G2-like family protein |