PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro07_G13012 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | bZIP | ||||||||
Protein Properties | Length: 224aa MW: 25085.9 Da PI: 7.3553 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 28.9 | 2.4e-09 | 83 | 126 | 7 | 50 |
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 rr NReA r++R++Kka + Lee+vk+L+ N++L +l+ Ro07_G13012 83 RRRPSGNREAVRKYREKKKAHTSYLEEEVKKLQLLNQQLVRKLQ 126 566667*********************************98887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MDDGEVETSD HALFPKPNSS SNFHVDTFVK NNTRTCLHTH TCNLPGPAAA HTHTCYHTHT 60 QVLPSEDDDH AKNKEHSVAK PKRRRPSGNR EAVRKYREKK KAHTSYLEEE VKKLQLLNQQ 120 LVRKLQGQAS LEAEFLRLRS LLLDFRGKID SEFQKHYCEL QSTGGETGLS CQTDLPCFCL 180 PAVGSSLQAR IDGATGKRMV SFGGNCQDAS YDDNDGTYEV LSSH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35040.1 | 5e-18 | bZIP family protein |