PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro07_G11386 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | GRF | ||||||||
Protein Properties | Length: 257aa MW: 28305.8 Da PI: 9.5305 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 79 | 4.4e-25 | 87 | 131 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e+ Ro07_G11386 87 DPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVES 131 79****************************************986 PP | |||||||
2 | QLQ | 67.4 | 3.4e-23 | 25 | 61 | 1 | 37 |
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+FT +Q+q+L++Q+l++Ky++a++PvPp+L+++iqk Ro07_G11386 25 SPFTMSQWQELEHQALIFKYMMAGMPVPPDLVLPIQK 61 89*********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MNSCSSGGGG GGTGNLMGMG MGMRSPFTMS QWQELEHQAL IFKYMMAGMP VPPDLVLPIQ 60 KSFESISQRF FHHPTMGYCS FYGKKVDPEP GRCRRTDGKK WRCSKDAYPD SKYCERHMHR 120 GRNRSRKPVE SQTMTQSSST VTSLTVTGTS SGTGSFQNLP LNAFGNTQGT GTGTNQSHYQ 180 IDSIPFGIPN KDYRYLQGLK PEIGEHSFLS DTSGSNRGLQ MDSPLDSTWP LMPSRVASFP 240 ASKSVYGRWA GHESTPT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 5e-46 | GRF family protein |