PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro07_G04695
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family bZIP
Protein Properties Length: 359aa    MW: 39946.3 Da    PI: 6.0186
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro07_G04695genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.24.6e-10156212561
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                  kr++r   NR +A rs +RK  +i eLe+kv++L++e ++L  +l   +     l s
  Ro07_G04695 156 KRAKRILANRQSAARSKERKARYISELERKVQTLQTEATTLSAQLTLFQRDTTGLSS 212
                  9****************************************9998877666655555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MQDPANVKPD PNPTSQDSQR PPMTTSFPDA SPSLTFRGSY HRRAQSEVQF RIPDDLDLLQ  60
DPFEGPSASF EELGSEDDLF CTYMDIEKLG SKLEDGPAGQ KPENAGGSSQ TETGGELNAR  120
PRHRHSNSMD GSLESIEAKK AMAPEKLAEL WAVDPKRAKR ILANRQSAAR SKERKARYIS  180
ELERKVQTLQ TEATTLSAQL TLFQRDTTGL SSENTELKIR LQAMEQQAQL RDALNDALKK  240
ELERLKIATG EALTHTDSYN LGMHHFPYSQ SSYFPSQPQS GPRDPQNIQM PQFHQFQSTM  300
PDPHQPMLGA VAQSHACSEM LQQDSIGRFQ GLDINNRGGS HIVKPEGPSI SAGETNRRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40620.11e-121bZIP family protein