PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro06_G29026 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | WRKY | ||||||||
Protein Properties | Length: 550aa MW: 60625.4 Da PI: 8.9983 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 104.1 | 7.5e-33 | 203 | 259 | 3 | 60 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers d+++ ei+Y+geHnh+k Ro06_G29026 203 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSL-DGQIAEIVYKGEHNHSK 259 9***************************************.***************85 PP | |||||||
2 | WRKY | 102.9 | 1.8e-32 | 403 | 459 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+vkg+++prsYYrCts +C+v+k+ver +edpk++++tYeg+Hnh+ Ro06_G29026 403 DGFRWRKYGQKVVKGNPYPRSYYRCTSVKCSVRKHVERVSEDPKAFITTYEGKHNHD 459 9*******************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 550 aa Download sequence |
MESKSLEMDI KEAERVVIAK PVASRPTCSS FKSFTELLTG AIEASPSNVS SETAVPAIRP 60 KTVRFKPMVN HPVAGLVSSQ AETSGAAVSN SAEKVSKSDS KSTVLYKPLA KVVSRATVSA 120 LANLGNFNTS HQQTQSSVVA GVVLHPNRDK CIRTQLISNL YQNSSSCADT NQITEPVKIV 180 SQNMEEDAKT IPSSTNSDRP SYDGYNWRKY GQKQVKGSEY PRSYYKCTHP NCPVKKKVER 240 SLDGQIAEIV YKGEHNHSKP QPPKRSSSGT QGSGFASDAT GQDNNTRLWN SHLNEKNEDS 300 EGRVEDQNEV GIPVHSYQSK SLVHYDPLAT GALNAGGATP DNSCGVSGEC EEGSKGVEAE 360 DYEPRSKRRK SENQSNEAGI SGEAVQEPRV VVQSSADSEI TGDGFRWRKY GQKVVKGNPY 420 PRSYYRCTSV KCSVRKHVER VSEDPKAFIT TYEGKHNHDM PLRTANPGAS SEKDTQAPPT 480 NTKLAARYSD VHFDWSAAKN TWWNGITLKV DNFVARMPLN CKDRDQVKRF NYRLCYYCTQ 540 KNADSIISRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37260.1 | 1e-114 | WRKY family protein |