PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro06_G29026
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family WRKY
Protein Properties Length: 550aa    MW: 60625.4 Da    PI: 8.9983
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro06_G29026genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.17.5e-33203259360
                  -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
         WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                  DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers  d+++ ei+Y+geHnh+k
  Ro06_G29026 203 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSL-DGQIAEIVYKGEHNHSK 259
                  9***************************************.***************85 PP

2WRKY102.91.8e-32403459359
                  -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  Dg++WrKYGqK+vkg+++prsYYrCts +C+v+k+ver +edpk++++tYeg+Hnh+
  Ro06_G29026 403 DGFRWRKYGQKVVKGNPYPRSYYRCTSVKCSVRKHVERVSEDPKAFITTYEGKHNHD 459
                  9*******************************************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 550 aa     Download sequence    
MESKSLEMDI KEAERVVIAK PVASRPTCSS FKSFTELLTG AIEASPSNVS SETAVPAIRP  60
KTVRFKPMVN HPVAGLVSSQ AETSGAAVSN SAEKVSKSDS KSTVLYKPLA KVVSRATVSA  120
LANLGNFNTS HQQTQSSVVA GVVLHPNRDK CIRTQLISNL YQNSSSCADT NQITEPVKIV  180
SQNMEEDAKT IPSSTNSDRP SYDGYNWRKY GQKQVKGSEY PRSYYKCTHP NCPVKKKVER  240
SLDGQIAEIV YKGEHNHSKP QPPKRSSSGT QGSGFASDAT GQDNNTRLWN SHLNEKNEDS  300
EGRVEDQNEV GIPVHSYQSK SLVHYDPLAT GALNAGGATP DNSCGVSGEC EEGSKGVEAE  360
DYEPRSKRRK SENQSNEAGI SGEAVQEPRV VVQSSADSEI TGDGFRWRKY GQKVVKGNPY  420
PRSYYRCTSV KCSVRKHVER VSEDPKAFIT TYEGKHNHDM PLRTANPGAS SEKDTQAPPT  480
NTKLAARYSD VHFDWSAAKN TWWNGITLKV DNFVARMPLN CKDRDQVKRF NYRLCYYCTQ  540
KNADSIISRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.11e-114WRKY family protein