PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro06_G28717
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family WRKY
Protein Properties Length: 534aa    MW: 58260.5 Da    PI: 8.3572
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro06_G28717genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.16.5e-32240296259
                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  dD ynWrKYGqK+vkgse+prsYY+Ct+ +Cpvkkkvers   ++++ei+Y+g+Hnh+
  Ro06_G28717 240 DDRYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERSP-TGEITEIIYKGKHNHD 296
                  8****************************************.9**************7 PP

2WRKY106.71.2e-33419477159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  ldDgy+WrKYGqK+vkg+++prsYY+Ct+agC+v+k+ver+a+dpk+v++tYeg+Hnh+
  Ro06_G28717 419 LDDGYRWRKYGQKVVKGNPHPRSYYKCTYAGCNVRKHVERAATDPKAVITTYEGKHNHD 477
                  59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 534 aa     Download sequence    
MAAKHQDSIS APQPQRPVIT LPPRPSAEAL FSGGSGASPG PMTLVSSFFS DSCPDSEFRS  60
FSQLLAGAMG SPLGQSRPIM FGENQNPVGT SAKEGGSENG GDKNSGFKQS RPMNLMVTHS  120
PLFTVPPGMS PSGLLNSPAG FFAPPSPFGI SHQQALAHVT AQAALAQSNM QMQAEYQSSL  180
LAAPTESQTN NPSSIPNEAS QQQTAPSTSE LRSSMVQSSE ASHSDSKYHP SSHATDKPAD  240
DRYNWRKYGQ KQVKGSEYPR SYYKCTHLNC PVKKKVERSP TGEITEIIYK GKHNHDPPQP  300
NKRAKDGGGQ NGLIDSQPKL ENGLHRRVGD SNRSSEAVPE RDHEYTQAAP VQLPSDSEDL  360
GDGETREEGD ADEPNPKRRH FSNLYCRNID GISSEVALPH KTVTEPKIIV QTRSEVDLLD  420
DGYRWRKYGQ KVVKGNPHPR SYYKCTYAGC NVRKHVERAA TDPKAVITTY EGKHNHDVPA  480
ARNSSHNIAN NNASQFKPPT VVAAEKHPLL KGREFGNNDQ RPVVLQLKEE QITV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.11e-127WRKY family protein