PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro06_G27545 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | G2-like | ||||||||
Protein Properties | Length: 246aa MW: 25804.7 Da PI: 6.3037 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 97.2 | 1.2e-30 | 115 | 168 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl Ro06_G27545 115 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 168 59*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 48.6 | 1.8e-15 | 117 | 167 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+++++++vdav+ lG + +ktI++ m g+t++++ s++qky+ Ro06_G27545 117 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 167 789*******************9***************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MREDDSNWFS RWEEQLPSPE ELMPLSQTLI SPDLALAFDI RSNPNPNPNT NTNTNTTSSP 60 QHAPTPPPPP ANSLPPATPT HPNSSADFAD SADLGSGGGG GGGGPGDEPA RTLKRPRLVW 120 TPQLHKRFVD AVAHLGIKNA VPKTIMQLMS VDGLTRENVA SHLQKYRLYL KRMQGLSAGT 180 GGGGGGGGGS ADPATDHLFA SSPAVHRMGA PVHSPAVPGY IEDMESANAI AATARRVLTL 240 FPTGDD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10760.1 | 5e-58 | G2-like family protein |