PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro06_G24980 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | WRKY | ||||||||
Protein Properties | Length: 261aa MW: 28526.7 Da PI: 4.8232 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.2 | 2.2e-30 | 75 | 133 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D +nWrKYGqK++kgs++pr+YYrC+s+ Cp++k+ver++ dp++++itY +Hnh+ Ro06_G24980 75 SDSWNWRKYGQKPIKGSPYPRGYYRCSSSkACPARKQVERNRLDPRMLIITYACDHNHP 133 69*************************9989***************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MKEYPKYDRN PVFSDSQDPE PISENDPESP SSGEEAKVTI APSPKKRRGV QKRVVSVPIG 60 DVEGPKGKGD GYPPSDSWNW RKYGQKPIKG SPYPRGYYRC SSSKACPARK QVERNRLDPR 120 MLIITYACDH NHPMPSTKGP HPAAIVTTSP AAEPELPAPS EELTAFASQA GLELSNNSAA 180 LLGDYGWLDD VASSTTVLES SICVGHSDYM NVDVATRLDD EDENLFADLG ELPEGSVFFP 240 HRMLISDEQN QRCSVSVVTT G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58710.2 | 2e-73 | WRKY family protein |