PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro06_G18307 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | NAC | ||||||||
Protein Properties | Length: 191aa MW: 22141.4 Da PI: 7.5702 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 94.4 | 1.8e-29 | 8 | 126 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 pGfrFhP+d+e++ +yL++k+ g+++++ +vi+++d+y+ P++Lp +v + e++ewyf+++r +++ tk+gy a+ d+++++ +++ Ro06_G18307 8 PGFRFHPSDDEIIGFYLTNKILGRPIPF-DVINTIDVYSNSPNQLPlGNVGHfEDNEWYFYTTRPNSS------LFLTKDGYFAAS-MDEQIFH-NNQ 96 9***************************.9****************6444434899*******98854......457999*99876.6789999.899 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg k++++fy gr p+g kt+Wv+ e+r+ Ro06_G18307 97 VVGFKQIMTFYLGRPPTGMKTNWVVLEFRV 126 ****************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence |
MPSPCPLPGF RFHPSDDEII GFYLTNKILG RPIPFDVINT IDVYSNSPNQ LPLGNVGHFE 60 DNEWYFYTTR PNSSLFLTKD GYFAASMDEQ IFHNNQVVGF KQIMTFYLGR PPTGMKTNWV 120 VLEFRVNPLI FPAGKLDNVV QEKLSSFVMC KILHTQENLI KLPEKRVRDE RDSSRIVMEE 180 LQSKRPNLQI R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10490.1 | 6e-32 | NAC family protein |