PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro06_G17602
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family NAC
Protein Properties Length: 334aa    MW: 38066.7 Da    PI: 6.9363
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro06_G17602genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM182.41.1e-56161421129
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                  lppGfrFhPtdeel+++yL +kv ++ +++ ++i evd++k+ePwdLp ++k +ekewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++  ++
  Ro06_G17602  16 LPPGFRFHPTDEELISHYLSPKVLDSCFSA-RAIGEVDLNKCEPWDLPWRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYK-AKA 111
                  79*************************999.89***************888999****************************************.999 PP

          NAM  99 lvglkktLvfykgrapkgektdWvmheyrle 129
                  lvg+kktLvfykgrapkgekt+Wvmheyrle
  Ro06_G17602 112 LVGMKKTLVFYKGRAPKGEKTNWVMHEYRLE 142
                  *****************************85 PP

Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MENVSVFINE DEQMELPPGF RFHPTDEELI SHYLSPKVLD SCFSARAIGE VDLNKCEPWD  60
LPWRAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT GKDKEIYKAK ALVGMKKTLV  120
FYKGRAPKGE KTNWVMHEYR LEGKYSAYNL PKTAKNEWVI CRIFQKCSGG KKTHISGLVR  180
ESSFGNELRP SLLPPLMDSP PYNNSDTKTT TVGETSQVSC FSDPMEDQKT QDDIIDSFNN  240
SHHISNSNSS HLLASSSSFP FKSSVQNSYF TNQIAPNTGN LQYPDSGLIQ DQSILRLLTE  300
NHAPNMRRSS NYLEGPDVPS YSSAPIEFDS LWNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.11e-117NAC family protein