PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro06_G17302
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family WRKY
Protein Properties Length: 471aa    MW: 51291.8 Da    PI: 6.8726
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro06_G17302genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.71.3e-29113170260
                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                  +DgynWrKYGqK v+g+ + rsYYrCt+++Cpvk++vers+ ++++++++Y g+H+h+k
  Ro06_G17302 113 EDGYNWRKYGQKLVRGNLYVRSYYRCTHPKCPVKRQVERSH-NGQITDTVYFGQHDHPK 170
                  8****************************************.***************85 PP

2WRKY80.32e-25282336159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  ++Dgy+WrKYGqK vkg+++pr    C+ +gCpvkk+ver+ +d kvv+ tYeg+H+h+
  Ro06_G17302 282 VNDGYRWRKYGQKLVKGNPNPR----CSNPGCPVKKHVERAFNDSKVVIATYEGQHDHD 336
                  58*******************6....********************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 471 aa     Download sequence    
MVSLGKDVTD KVASDKLPKK ENPDSEIHVP HQTPNNGVCP LQSDDKGSAQ SILPYKALQV  60
PDGAVAALQS NQEGSVSSLT SEKALLTPET GAPVFQSGQE GSTSSRVRER PLEDGYNWRK  120
YGQKLVRGNL YVRSYYRCTH PKCPVKRQVE RSHNGQITDT VYFGQHDHPK PQLSVPIAVG  180
FAVSVGEERT EVPLLNSVED KPLEAHGNSS NQIEPVDPLQ HSNVADKEGV QGVLSQSNRT  240
RDGDPDSKRQ KKEKHNGNSI PVDKPTGEPR VVVQTMSEVD IVNDGYRWRK YGQKLVKGNP  300
NPRCSNPGCP VKKHVERAFN DSKVVIATYE GQHDHDMPPS RTVTPNTAAS NVLTAAHNSD  360
SGTKSEGNAV CRAIAACTSP EHEGKPIEQP NGESRTKSRS IGVAASDMVV DSDLCPERKL  420
NDQLNGKACV QEEGDPPDKI VCRANKLQNG ESESNPPEEE NRKPKAEPVQ G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G04880.11e-82WRKY family protein