PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro06_G16328 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | WRKY | ||||||||
Protein Properties | Length: 542aa MW: 59132 Da PI: 6.397 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.9 | 5.6e-30 | 214 | 272 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK kg+++pr+YYrCt a Cpv+k+v+r+ +d +++++tYeg+Hnh+ Ro06_G16328 214 NDGCQWRKYGQKIAKGNPCPRAYYRCTVApACPVRKQVQRCIDDMSILITTYEGTHNHP 272 8***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 542 aa Download sequence |
MPNSNSTAAA AAAEKKVESF GYQEGHSEKE NDELVDAKAE MSEVREENAR LKKTLEHMMK 60 DYQSLQLRFF DILRQESHSK KATNPSPTMG ATTSHIEIEE PHDQLLSLCL GRSPRDPILI 120 NDESKLVQVD HHQDLKANLT LGLGSKLQLP TELVLSGPIL ENSSEEPKES EVSPSNTKTP 180 KTMRNEDDEA LQQANAAKRA RVSVRARCDT PTLNDGCQWR KYGQKIAKGN PCPRAYYRCT 240 VAPACPVRKQ VQRCIDDMSI LITTYEGTHN HPLPMTATSM ASTTSAAASM LLSGSSTSQL 300 PGLGSSHGLD FGLLDSSRPQ QLYMPKLSSS PLFPTVTLDL TSSPSSSTTQ YSTFPSSLSF 360 CSSESNINLP SSWGNGYPKF GTLHPFDKTN QEYFQPNHQA SSQVSLTETL TKAITSDPNF 420 KSVIAVALSS MAGGGAATYG SQGIGERLGQ HLTQNGKGCA SSIFNSMSSS DSQKENLMLL 480 QPPPDSKSTT STPAIRDKNV ILSNRQYELD SAESHSNDYR ANKWLIIYGL KGFLLYASED 540 ES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15130.1 | 3e-56 | WRKY family protein |