PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro06_G15510 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | C2H2 | ||||||||
Protein Properties | Length: 148aa MW: 16371.7 Da PI: 7.9957 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.4 | 5.2e-05 | 22 | 44 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+ksFs+ + L H++ H Ro06_G15510 22 FKCLHCPKSFSNGHALGGHQNAH 44 89*****************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 148 aa Download sequence |
MAPSCKTNSE DSTANSPPKN HFKCLHCPKS FSNGHALGGH QNAHRGLDKG MMKTLKQILA 60 TYRKQFPGNS SSPSVTAQVP SAEVILGHEL TPERLTEPEM ARGGRTIDFL KEWKLIYTDP 120 IVQEKIEENL NLELKLGSSW EGCLLLTN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G01860.1 | 1e-07 | C2H2 family protein |