PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro06_G14746 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | WRKY | ||||||||
Protein Properties | Length: 207aa MW: 24063 Da PI: 6.7684 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 78.5 | 7.7e-25 | 22 | 83 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +dDg++WrKYGqKe+ ++ +prsY+rC+ + gC+++k+v++ ++dp ++ +tY g+H+++ Ro06_G14746 22 VDDGHAWRKYGQKEILNASHPRSYFRCSLKydqGCKATKQVQKVEDDPCLFRTTYFGNHTCT 83 59**************************998899**************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
MAAYCTCRKT SNSWTRDTTD FVDDGHAWRK YGQKEILNAS HPRSYFRCSL KYDQGCKATK 60 QVQKVEDDPC LFRTTYFGNH TCTHSFPKAS ELILDSVSSS PREESDSKFM IIFENNNNLT 120 YKQERPFFSS YSSTEREIIK PNHVASIQSS SCDYLGDQLT VFESSDLISG LLKTMEFDHE 180 GMLYYRTIMG YFDQEILPIL SLRMFKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 3e-27 | WRKY family protein |