PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro06_G12778
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family G2-like
Protein Properties Length: 394aa    MW: 44186 Da    PI: 6.6835
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro06_G12778genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like95.34.8e-30109162255
      G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                  prlrWtp+LH +F+ ave+LGG+ekAtPk +l+lm+v gL+++hvkSHLQ+YR+
  Ro06_G12778 109 PRLRWTPDLHLAFLLAVERLGGQEKATPKLVLQLMNVRGLSIAHVKSHLQMYRS 162
                  8****************************************************7 PP

2Myb_DNA-binding44.92.7e-14110161148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+rWT+++++ ++ av++lGg    t+k++ + m+  g++  ++ks++q+y+
      Ro06_G12778 110 RLRWTPDLHLAFLLAVERLGGQekaTPKLVLQLMNvRGLSIAHVKSHLQMYR 161
                      89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    
MIVSGVAEEE THIYMADPEM IEISDEADND DENTSDGSKD IQSKSSSPKS SCLFFDLNEE  60
ASSTGDDHNH EDVSNNIAEA MGSRTSTEGK EQSATSSGAV RQYIRSKMPR LRWTPDLHLA  120
FLLAVERLGG QEKATPKLVL QLMNVRGLSI AHVKSHLQMY RSKKLDESGQ VLPQSNTGML  180
FQGRDHTVEA YQKFNPYRHF RPDDRGNFPS PPLKHQHCDD FNANSSRFIS LLSKNSGMQN  240
YGSSIIRSSH MFSAREAMTR VNGPIRPSRF LEEKRWPPRE MIGNHMKVIR SHSLNISWRD  300
TIDVAQPNSE RSPQASSNVK FISNSYQPLS DPHEVQSVNG ETFRVNDSDQ ESMKDIETTL  360
SLSLSSSSAR QQHQSSTPTS RIRLLSFPLS ISGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.14e-36G2-like family protein