PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro06_G11581 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | NF-YB | ||||||||
Protein Properties | Length: 218aa MW: 23438 Da PI: 6.155 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 120.3 | 8.4e-38 | 24 | 88 | 1 | 65 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingd 65 vreqdr+lPian+srimkk+lPan+ki+kdaketvqecvsefisf+tseasdkcqrekrkting+ Ro06_G11581 24 VREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGK 88 69*************************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MADAPASPGG GSHDSGEHSP RSNVREQDRY LPIANISRIM KKALPANGKI AKDAKETVQE 60 CVSEFISFIT SEASDKCQRE KRKTINGKGG ESSSKKEVQP SPNAQVSHQG SFSQGEYIIV 120 LAVAFYSCEN NALSAVEYAN PTNDGSYARL GVDGLVESMD SQFYDKNECL LPAVDSSQDS 180 HCLDHLGIFV LGLGASVREN GSRVDAPRPN KLGSLIHH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53340.1 | 7e-46 | NF-YB family protein |