PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro06_G09878 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | TALE | ||||||||
Protein Properties | Length: 596aa MW: 66433.8 Da PI: 7.3435 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 29.6 | 1.1e-09 | 383 | 420 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gL+ +qV++WF N R + Ro06_G09878 383 FEHflHPYPTDTDKIMLAKQTGLSRSQVSNWFINARVR 420 554459******************************88 PP | |||||||
2 | BELL | 107 | 1.2e-34 | 247 | 315 | 4 | 72 |
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e ++kk++L+s+l+eV++rYkqy++q+q+v+ sFe vaglg+a+pY++lA ka++rhF++Lk+ai++q+ Ro06_G09878 247 ESRRKKSRLISMLDEVYRRYKQYYHQMQAVVTSFEYVAGLGNAAPYANLAIKAMTRHFKSLKNAITDQL 315 7899**************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 596 aa Download sequence |
MAESFEPYHV PQQSRRDKLR FLPGQTHPVC VEPGPHLLHG CAASFYDPTS TSLISSSSEL 60 VKEEGHVNLM GFINSSATSL SLHNFRHPYM DPQPSNFAPN PNSVHDINNL FLYPNQHHHH 120 HLRDFHDDVL FKPEPLSLSL SSQPVQVNNL QQRYGYSGIN DGGHGSRSPG PSPLGPFTGY 180 ASILKGSRFL KPAQQLLEEF CDVGSSSRDI YTAVSRIMTD DSSSFLEDPS IESFDDPVSV 240 ASGDGGESRR KKSRLISMLD EVYRRYKQYY HQMQAVVTSF EYVAGLGNAA PYANLAIKAM 300 TRHFKSLKNA ITDQLQSRSS RDTTTYLSRD KDEAIPMLRS STRGIYSQHR SFHNTEVGEH 360 QPVWRPQRGL PERAVTVLRS WLFEHFLHPY PTDTDKIMLA KQTGLSRSQV SNWFINARVR 420 LWKPMVEEIH MLETRQAHIA SQRSGDQNAD RSNDRDHLPS ATSVASENPS TSTRRAQDTV 480 SKRARNEYPD VTVASTHEQL NLSYNNLPSH IHHVGHVGAS MAGGSTSGVS LTLGLHHQNN 540 GIGLSEPPYA IINTAQRFGL GLDGNSDGYA MGGFDAQNRH FGRDVMGGQL LHDFVG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G02030.1 | 1e-100 | TALE family protein |