PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro06_G09074 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | NAC | ||||||||
Protein Properties | Length: 536aa MW: 59552.7 Da PI: 5.4071 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 81.9 | 1.3e-25 | 4 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkk..vegkk.leleevikevdiy.kvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 +p+GfrFhPtdeel+ +yL k v++k ++ v++e+d+y ++ePw++ + ++ ++++yfF++ +k +++g+r nr++ +g+W++ +++ Ro06_G09074 4 VPVGFRFHPTDEELIRHYLYMKnkVRSKGaEAIAGVVPEFDLYgETEPWKIWEsygGADLYDQDLYFFTRLKKVNPHGTRINRKIGTGTWSEGEPSRA 101 599**************9976611555553334557*****99568*****74233333367799********************************* PP NAM 92 vlsk.......kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +++ +g k+ + + ++a++ ++ W m+ey+l Ro06_G09074 102 IFVGektatkkHKTPIGRKRKFRYE-NKASE-QHGCWYMEEYSL 143 *99755555444444********97.44444.799*******98 PP | |||||||
2 | NAM | 26.2 | 2.3e-08 | 189 | 214 | 2 | 27 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk 27 p+GfrFhPtd+el++++L +k +gk+ Ro06_G09074 189 PVGFRFHPTDQELISYFLYNKNKGKD 214 89*******************99986 PP | |||||||
3 | NAM | 38.3 | 4.1e-12 | 323 | 426 | 29 | 128 |
NAM 29 eleevikevdiy.kvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektd 120 + +++++e+d++ ++ePw++ ++k+ +++++fF++ +k +++g+r r + + g+W++ +k++++ +g+ +g k+ L + k +p+ ++ Ro06_G09074 323 KDNKFLHEFDLFgSTEPWEIWDMFKGaelCNQDLFFFTQLKKVNPKGSRIGRkVGSGGTWSEGDVSKSIYDDrTGQPIGRKRKLRYEKVGSPH--HAC 418 333569999987367*****74333322255689******************5556899***********9868889*********9877777..8** PP NAM 121 Wvmheyrl 128 W ++ey+l Ro06_G09074 419 WYLDEYSL 426 ******87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 536 aa Download sequence |
MACVPVGFRF HPTDEELIRH YLYMKNKVRS KGAEAIAGVV PEFDLYGETE PWKIWESYGG 60 ADLYDQDLYF FTRLKKVNPH GTRINRKIGT GTWSEGEPSR AIFVGEKTAT KKHKTPIGRK 120 RKFRYENKAS EQHGCWYMEE YSLDDGIKSA EYVICRLREN NRSGGGGGGN RDLLASSVAA 180 SMEASGPIPV GFRFHPTDQE LISYFLYNKN KGKDGGGLLL MDADGGTLLL TAEEEEKEGP 240 PAAEEAEKKE GQAPEAEAEV EEENNGAGEA PPPLPEKKVK KDGEGEAAPA LLLLEYKKKS 300 DGEGLALLSM EAEEVCNNVN TNKDNKFLHE FDLFGSTEPW EIWDMFKGAE LCNQDLFFFT 360 QLKKVNPKGS RIGRKVGSGG TWSEGDVSKS IYDDRTGQPI GRKRKLRYEK VGSPHHACWY 420 LDEYSLFDAD IGDYVICRLR KNDKLAAAAF SSEPNNNRKR KSTPPTTTTT TTTEEESKQQ 480 EEEDSSKAKR KRTTGLTLVE EAAADVLMSM ANTTINNSKL KLFGIEIGST PGVGGE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62380.1 | 2e-19 | NAC family protein |