PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro06_G09074
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family NAC
Protein Properties Length: 536aa    MW: 59552.7 Da    PI: 5.4071
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro06_G09074genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM81.91.3e-2541431128
          NAM   1 lppGfrFhPtdeelvveyLkkk..vegkk.leleevikevdiy.kvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                  +p+GfrFhPtdeel+ +yL  k  v++k    ++ v++e+d+y ++ePw++ +    ++  ++++yfF++ +k +++g+r nr++ +g+W++   +++
  Ro06_G09074   4 VPVGFRFHPTDEELIRHYLYMKnkVRSKGaEAIAGVVPEFDLYgETEPWKIWEsygGADLYDQDLYFFTRLKKVNPHGTRINRKIGTGTWSEGEPSRA 101
                  599**************9976611555553334557*****99568*****74233333367799********************************* PP

          NAM  92 vlsk.......kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  +++        +++ +g k+ + +  ++a++ ++  W m+ey+l
  Ro06_G09074 102 IFVGektatkkHKTPIGRKRKFRYE-NKASE-QHGCWYMEEYSL 143
                  *99755555444444********97.44444.799*******98 PP

2NAM26.22.3e-08189214227
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkk 27 
                  p+GfrFhPtd+el++++L +k +gk+
  Ro06_G09074 189 PVGFRFHPTDQELISYFLYNKNKGKD 214
                  89*******************99986 PP

3NAM38.34.1e-1232342629128
          NAM  29 eleevikevdiy.kvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektd 120
                  + +++++e+d++ ++ePw++  ++k+    +++++fF++ +k +++g+r  r + + g+W++   +k++++  +g+ +g k+ L + k  +p+  ++ 
  Ro06_G09074 323 KDNKFLHEFDLFgSTEPWEIWDMFKGaelCNQDLFFFTQLKKVNPKGSRIGRkVGSGGTWSEGDVSKSIYDDrTGQPIGRKRKLRYEKVGSPH--HAC 418
                  333569999987367*****74333322255689******************5556899***********9868889*********9877777..8** PP

          NAM 121 Wvmheyrl 128
                  W ++ey+l
  Ro06_G09074 419 WYLDEYSL 426
                  ******87 PP

Sequence ? help Back to Top
Protein Sequence    Length: 536 aa     Download sequence    
MACVPVGFRF HPTDEELIRH YLYMKNKVRS KGAEAIAGVV PEFDLYGETE PWKIWESYGG  60
ADLYDQDLYF FTRLKKVNPH GTRINRKIGT GTWSEGEPSR AIFVGEKTAT KKHKTPIGRK  120
RKFRYENKAS EQHGCWYMEE YSLDDGIKSA EYVICRLREN NRSGGGGGGN RDLLASSVAA  180
SMEASGPIPV GFRFHPTDQE LISYFLYNKN KGKDGGGLLL MDADGGTLLL TAEEEEKEGP  240
PAAEEAEKKE GQAPEAEAEV EEENNGAGEA PPPLPEKKVK KDGEGEAAPA LLLLEYKKKS  300
DGEGLALLSM EAEEVCNNVN TNKDNKFLHE FDLFGSTEPW EIWDMFKGAE LCNQDLFFFT  360
QLKKVNPKGS RIGRKVGSGG TWSEGDVSKS IYDDRTGQPI GRKRKLRYEK VGSPHHACWY  420
LDEYSLFDAD IGDYVICRLR KNDKLAAAAF SSEPNNNRKR KSTPPTTTTT TTTEEESKQQ  480
EEEDSSKAKR KRTTGLTLVE EAAADVLMSM ANTTINNSKL KLFGIEIGST PGVGGE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.12e-19NAC family protein