PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Ro06_G08300 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
|
||||||||
Family | TALE | ||||||||
Protein Properties | Length: 385aa MW: 43186.2 Da PI: 4.6715 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 27 | 7.7e-09 | 257 | 290 | 22 | 55 |
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++ee+ +L+ +gL+++q+ +WF N+R ++ Ro06_G08300 257 WPYPTEEEKLQLSVATGLDQKQINNWFINQRKRH 290 58*****************************885 PP | |||||||
2 | ELK | 31.3 | 4.5e-11 | 210 | 231 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++Ll+KYsgyL+ L++ F+ Ro06_G08300 210 ELKDMLLHKYSGYLSKLRKDFL 231 9********************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 385 aa Download sequence |
MEDFYRLNPM NMIASSSENV VQVDNSTRIN SSTNTCGGGF NGGPIILSDD NINMLQFQTD 60 QGMNELIKTQ IANHPRYPDL VAAYIDCQKV GAPPEMKNLL EEIGRLSLPI STCRSEIGAD 120 PELDEFMDSY CGVLHTYKEE LSKPVDEATT FLSNIETQLS NLCKGSFQKN NWDYHSTDEA 180 VGSSEEDFSY GEVEAAEGQD ASGFRSGDKE LKDMLLHKYS GYLSKLRKDF LKTRKKGKLP 240 KDARSALLEW WNTHYRWPYP TEEEKLQLSV ATGLDQKQIN NWFINQRKRH WKPSEDMKFA 300 LMEGVSGSIN GEGGPSLLFD TGFGNDEIML IEISIITSSI NNPWPSSGNK AKYLDLDSNH 360 HLFKGCSSGD DNIQPSSAKL PLFNL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G23380.1 | 8e-87 | TALE family protein |