PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro06_G06729
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family WRKY
Protein Properties Length: 547aa    MW: 59854.1 Da    PI: 4.9129
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro06_G06729genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.21.1e-30340398259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                   Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
  Ro06_G06729 340 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILITTYEGNHNHP 398
                  7***************************99****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 547 aa     Download sequence    
MAKGGGLSID SDPIGYLSLH KPIVLNSFQQ EDQYPNRTHK EQDLSTFSMD HSPPPQTLQF  60
SVNLNCTDDH HRQNSPPPSS SSDQRKVVDE RDFFADDNNK ADEASTDVAD KMDFDDGPSG  120
IEFNVNTGLN LLITNTSSDQ SVVDDGISSS IEDKRAKSEL AVLQAELERM NAENQRLKGM  180
LNQVTTNYNA LQVHLLSLMQ NQKADNSVEA EEKKPNNGNG SQLVVPRQFM DLGLAANGDT  240
EEPSQSSSDE RSREQRSGSG DNGKISTGHV GDEGLAFDQE KKEFVRGVSA REESPEQQTQ  300
SWGPNKVPRL NSPKEVDQTE ATMRKARVSV RARSEAPMIT DGCQWRKYGQ KMAKGNPCPR  360
AYYRCTMAAG CPVRKQVQRC AEDRTILITT YEGNHNHPLP PAAMAMASTT SSAARMLLSG  420
SMPSADGLMD SNFLTRTILP CSSSMATISA SAPFPTVTLD LTQSPNPLQF QKPPGQFNIP  480
FPNPSQNFTN GPVSLLPQIF GQALYNQSKF SGLQMSQDMD RNAQLGGPQS QQTQQGQQQN  540
SLADTGD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-121WRKY family protein