PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro06_G06729 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | WRKY | ||||||||
Protein Properties | Length: 547aa MW: 59854.1 Da PI: 4.9129 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.2 | 1.1e-30 | 340 | 398 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ Ro06_G06729 340 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILITTYEGNHNHP 398 7***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 547 aa Download sequence |
MAKGGGLSID SDPIGYLSLH KPIVLNSFQQ EDQYPNRTHK EQDLSTFSMD HSPPPQTLQF 60 SVNLNCTDDH HRQNSPPPSS SSDQRKVVDE RDFFADDNNK ADEASTDVAD KMDFDDGPSG 120 IEFNVNTGLN LLITNTSSDQ SVVDDGISSS IEDKRAKSEL AVLQAELERM NAENQRLKGM 180 LNQVTTNYNA LQVHLLSLMQ NQKADNSVEA EEKKPNNGNG SQLVVPRQFM DLGLAANGDT 240 EEPSQSSSDE RSREQRSGSG DNGKISTGHV GDEGLAFDQE KKEFVRGVSA REESPEQQTQ 300 SWGPNKVPRL NSPKEVDQTE ATMRKARVSV RARSEAPMIT DGCQWRKYGQ KMAKGNPCPR 360 AYYRCTMAAG CPVRKQVQRC AEDRTILITT YEGNHNHPLP PAAMAMASTT SSAARMLLSG 420 SMPSADGLMD SNFLTRTILP CSSSMATISA SAPFPTVTLD LTQSPNPLQF QKPPGQFNIP 480 FPNPSQNFTN GPVSLLPQIF GQALYNQSKF SGLQMSQDMD RNAQLGGPQS QQTQQGQQQN 540 SLADTGD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62300.1 | 1e-121 | WRKY family protein |