PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro06_G05624 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | G2-like | ||||||||
Protein Properties | Length: 353aa MW: 39599.1 Da PI: 8.674 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 103 | 1.8e-32 | 69 | 122 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH rFv+ave+LGG+++AtPk +l+lm++kgL+++hvkSHLQ+YR+ Ro06_G05624 69 PRLRWTPDLHLRFVHAVERLGGQDRATPKMVLQLMNIKGLSIAHVKSHLQMYRS 122 8****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 52.7 | 9.9e-17 | 70 | 121 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++v+av++lGg t+k + + m+ kg++ ++ks++q+y+ Ro06_G05624 70 RLRWTPDLHLRFVHAVERLGGQdraTPKMVLQLMNiKGLSIAHVKSHLQMYR 121 89************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 353 aa Download sequence |
MEGMSQGESE CSKTSPSDDQ NEEGSESGEN YGGEISRPKT NGGSSSNSTV EESDQKKGSV 60 RPYVRSKMPR LRWTPDLHLR FVHAVERLGG QDRATPKMVL QLMNIKGLSI AHVKSHLQMY 120 RSKKIDDAGQ VIADQGHHLV ECGDKNIYNL SQLPMLQGYN RSHMSTSFRY GYGHVNSWNT 180 SAYENLRHPR NTSGIFEGTM AEKLFGSSTT TSNWTSTAYR NFLTTSEQVP SWITHTLKDG 240 CNQLYNIRRQ SLQAHQTRLS LIDHLNPTTH VQPKAKDHFT SLNSAPTNLQ VLRTLKRKAS 300 DCDLDLDLSL RLTSKKNNES QESTTLREDE VDCTSLSLSL YSPASAKLSR VKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38300.1 | 1e-62 | G2-like family protein |