PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro06_G05624
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family G2-like
Protein Properties Length: 353aa    MW: 39599.1 Da    PI: 8.674
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro06_G05624genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1031.8e-3269122255
      G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                  prlrWtp+LH rFv+ave+LGG+++AtPk +l+lm++kgL+++hvkSHLQ+YR+
  Ro06_G05624  69 PRLRWTPDLHLRFVHAVERLGGQDRATPKMVLQLMNIKGLSIAHVKSHLQMYRS 122
                  8****************************************************7 PP

2Myb_DNA-binding52.79.9e-1770121148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+rWT+++++++v+av++lGg    t+k + + m+ kg++  ++ks++q+y+
      Ro06_G05624  70 RLRWTPDLHLRFVHAVERLGGQdraTPKMVLQLMNiKGLSIAHVKSHLQMYR 121
                      89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MEGMSQGESE CSKTSPSDDQ NEEGSESGEN YGGEISRPKT NGGSSSNSTV EESDQKKGSV  60
RPYVRSKMPR LRWTPDLHLR FVHAVERLGG QDRATPKMVL QLMNIKGLSI AHVKSHLQMY  120
RSKKIDDAGQ VIADQGHHLV ECGDKNIYNL SQLPMLQGYN RSHMSTSFRY GYGHVNSWNT  180
SAYENLRHPR NTSGIFEGTM AEKLFGSSTT TSNWTSTAYR NFLTTSEQVP SWITHTLKDG  240
CNQLYNIRRQ SLQAHQTRLS LIDHLNPTTH VQPKAKDHFT SLNSAPTNLQ VLRTLKRKAS  300
DCDLDLDLSL RLTSKKNNES QESTTLREDE VDCTSLSLSL YSPASAKLSR VKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.11e-62G2-like family protein