PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro05_G27840 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | FAR1 | ||||||||
Protein Properties | Length: 163aa MW: 19027.3 Da PI: 7.8911 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 33.8 | 1.1e-10 | 74 | 137 | 2 | 64 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCka 64 f ++Y+ + F++rk+k+ + +g+it+r++vCsk+gkr++++ + ++k+r ++ etr +C Ro05_G27840 74 FCDDYSLAIDFNIRKNKKDTG-VDGNITRRRWVCSKQGKRDKKRYDnpNKKKRARKRETRENCLG 137 7789***********998776.9999***************999887788888899999***975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence |
MKSEDVTMEF VEVQQSDEDY FGTSMSQCES DMEQLLERSA RSFPIDINGK KYEDLTLKDF 60 QNTIFKTKEE AEDFCDDYSL AIDFNIRKNK KDTGVDGNIT RRRWVCSKQG KRDKKRYDNP 120 NKKKRARKRE TRENCLGIVI RDPEVAKTKV KNDNATVDGD KST |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 122 | 151 | KKKRARKRETRENCLGIVIRDPEVAKTKVK |