PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro05_G24452
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family NAC
Protein Properties Length: 656aa    MW: 74161 Da    PI: 4.3111
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro05_G24452genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM60.36.4e-19171512128
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka.......eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                   pG rF P ++elv  yLk+ ++g+k++     + ++d+y   ePw++ +++k+        +k++yfF++++k   t++r +r++ sg+W+a  + k
  Ro05_G24452  17 LPGERFCPMEDELVLLYLKPMLNGQKVPGRGRvVFDCDLYGRqEPWEIWETYKTrrpndlrLNKDLYFFTQHKKMDLTDSRIRRTVGSGTWRADDSGK 114
                  589***********************88765449999*996549****753333334333334588**************************999988 PP

          NAM  91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                   v s  +g +vglkk   +   ++ + ++  W+m e++l
  Ro05_G24452 115 IVNSVeTGLVVGLKKRYSYK--NEASVHHGCWIMYEFEL 151
                  7777657778******9998..45555799*******87 PP

Sequence ? help Back to Top
Protein Sequence    Length: 656 aa     Download sequence    
MQQQQFNEME ESRVNQLPGE RFCPMEDELV LLYLKPMLNG QKVPGRGRVV FDCDLYGRQE  60
PWEIWETYKT RRPNDLRLNK DLYFFTQHKK MDLTDSRIRR TVGSGTWRAD DSGKIVNSVE  120
TGLVVGLKKR YSYKNEASVH HGCWIMYEFE LLHRSKKQKK NNDYVLCLLR KNGEPQSEKK  180
RKQLPKEEVL GDNYVCGDGE NSNTEQEELL EPQVKRQLTI QPINNAPVVP IPSENENYAF  240
AAELEESLPC FEDDNVPSEA EAIGFQGEKN GGLQQLAAEV QSGHEENWGP SFGDERGILN  300
LLPENENDVF AAELEDLLPC FEDDNVPSEA EPNGFQGDEN GGLQQLDAEV QSGLEENWPG  360
PSFVDDHGIL NPLPEEDFLW EEMVEEMGIV QLEELVLNGV SSSNIDATVL PCITSMIELS  420
NSGLYLHDPP ILKSTLPLSL SAAVSSTLST YNPSSKSERI MHNTKSLFVD SFENVAIEYS  480
LPLLLAELQF SQIVLPVPCE TCLKKLFFEL GYHLLKFLLG TLMQFIKQLH WIKDRGNRCV  540
ALRPELTPSL ARLIEKLPLD DIEKELRSVD VLEDAVEKFF PQIENIECAL DSGLQGAAAK  600
VATILREKGQ SVDLVLEGKA LKWLILLGDS EWQMGVVGVK ILFTGEQQEI KLDELD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.27e-14NAC family protein