PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro05_G24452 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | NAC | ||||||||
Protein Properties | Length: 656aa MW: 74161 Da PI: 4.3111 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 60.3 | 6.4e-19 | 17 | 151 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka.......eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 pG rF P ++elv yLk+ ++g+k++ + ++d+y ePw++ +++k+ +k++yfF++++k t++r +r++ sg+W+a + k Ro05_G24452 17 LPGERFCPMEDELVLLYLKPMLNGQKVPGRGRvVFDCDLYGRqEPWEIWETYKTrrpndlrLNKDLYFFTQHKKMDLTDSRIRRTVGSGTWRADDSGK 114 589***********************88765449999*996549****753333334333334588**************************999988 PP NAM 91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 v s +g +vglkk + ++ + ++ W+m e++l Ro05_G24452 115 IVNSVeTGLVVGLKKRYSYK--NEASVHHGCWIMYEFEL 151 7777657778******9998..45555799*******87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 656 aa Download sequence |
MQQQQFNEME ESRVNQLPGE RFCPMEDELV LLYLKPMLNG QKVPGRGRVV FDCDLYGRQE 60 PWEIWETYKT RRPNDLRLNK DLYFFTQHKK MDLTDSRIRR TVGSGTWRAD DSGKIVNSVE 120 TGLVVGLKKR YSYKNEASVH HGCWIMYEFE LLHRSKKQKK NNDYVLCLLR KNGEPQSEKK 180 RKQLPKEEVL GDNYVCGDGE NSNTEQEELL EPQVKRQLTI QPINNAPVVP IPSENENYAF 240 AAELEESLPC FEDDNVPSEA EAIGFQGEKN GGLQQLAAEV QSGHEENWGP SFGDERGILN 300 LLPENENDVF AAELEDLLPC FEDDNVPSEA EPNGFQGDEN GGLQQLDAEV QSGLEENWPG 360 PSFVDDHGIL NPLPEEDFLW EEMVEEMGIV QLEELVLNGV SSSNIDATVL PCITSMIELS 420 NSGLYLHDPP ILKSTLPLSL SAAVSSTLST YNPSSKSERI MHNTKSLFVD SFENVAIEYS 480 LPLLLAELQF SQIVLPVPCE TCLKKLFFEL GYHLLKFLLG TLMQFIKQLH WIKDRGNRCV 540 ALRPELTPSL ARLIEKLPLD DIEKELRSVD VLEDAVEKFF PQIENIECAL DSGLQGAAAK 600 VATILREKGQ SVDLVLEGKA LKWLILLGDS EWQMGVVGVK ILFTGEQQEI KLDELD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24430.2 | 7e-14 | NAC family protein |