PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro05_G20765 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | NAC | ||||||||
Protein Properties | Length: 201aa MW: 22999.5 Da PI: 4.7323 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 120.9 | 1.1e-37 | 8 | 130 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk... 95 lppGfrF Ptdeelvv++L++k++ +++ +vi+++d+y ++Pw+L+ k+ e k+wyf+s+r +nr+t++gyWk g++++v+++ Ro05_G20765 8 LPPGFRFFPTDEELVVHFLQRKAALLPFHP-DVIPDLDLYPYDPWELNGKALCEGKQWYFYSRRT--------QNRVTSNGYWKPLGTEEPVITSssa 96 79*************************999.99**************97777789*******984........58*****************998777 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +vg+k+ + fy g+ap+g kt+W+mheyrl Ro05_G20765 97 tSSDKVGIKRYFGFYVGEAPSGIKTNWIMHEYRL 130 66677***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MGDNHFQLPP GFRFFPTDEE LVVHFLQRKA ALLPFHPDVI PDLDLYPYDP WELNGKALCE 60 GKQWYFYSRR TQNRVTSNGY WKPLGTEEPV ITSSSATSSD KVGIKRYFGF YVGEAPSGIK 120 TNWIMHEYRL SAVSDACSSS STTRSSKRRG HRKTVNEYSG YVLCRVYERD EDEGDDDGTE 180 LSCLDEVFLS LDDLDEISLP N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64530.1 | 1e-73 | NAC family protein |