PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro05_G20765
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family NAC
Protein Properties Length: 201aa    MW: 22999.5 Da    PI: 4.7323
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro05_G20765genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM120.91.1e-3781301128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk... 95 
                  lppGfrF Ptdeelvv++L++k++  +++  +vi+++d+y ++Pw+L+ k+  e k+wyf+s+r         +nr+t++gyWk  g++++v+++   
  Ro05_G20765   8 LPPGFRFFPTDEELVVHFLQRKAALLPFHP-DVIPDLDLYPYDPWELNGKALCEGKQWYFYSRRT--------QNRVTSNGYWKPLGTEEPVITSssa 96 
                  79*************************999.99**************97777789*******984........58*****************998777 PP

          NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                   ++ +vg+k+ + fy g+ap+g kt+W+mheyrl
  Ro05_G20765  97 tSSDKVGIKRYFGFYVGEAPSGIKTNWIMHEYRL 130
                  66677***************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MGDNHFQLPP GFRFFPTDEE LVVHFLQRKA ALLPFHPDVI PDLDLYPYDP WELNGKALCE  60
GKQWYFYSRR TQNRVTSNGY WKPLGTEEPV ITSSSATSSD KVGIKRYFGF YVGEAPSGIK  120
TNWIMHEYRL SAVSDACSSS STTRSSKRRG HRKTVNEYSG YVLCRVYERD EDEGDDDGTE  180
LSCLDEVFLS LDDLDEISLP N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.11e-73NAC family protein