PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro05_G19116
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family NAC
Protein Properties Length: 467aa    MW: 52676.1 Da    PI: 7.3151
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro05_G19116genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM159.61.2e-49391642128
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                  +pGfrFhPt+eel+ +yL++kvegk++++ e i+ +d+y+++Pw+Lp++++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + s++ + 
  Ro05_G19116  39 MPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPAMAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSENFRS 135
                  79***************************.89***************888889********************************************* PP

          NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                  +glkktLvfy+g+apkg +t+W+m+eyrl
  Ro05_G19116 136 IGLKKTLVFYSGKAPKGIRTSWIMNEYRL 164
                  ***************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    
MAIAATSRMS HEEDDSNNQN IKQGSHDADA DDHEHDMVMP GFRFHPTEEE LIEFYLRRKV  60
EGKRFNVELI TFLDLYRYDP WELPAMAAIG EKEWFFYVPR DRKYRNGDRP NRVTTSGYWK  120
ATGADRMIRS ENFRSIGLKK TLVFYSGKAP KGIRTSWIMN EYRLPHHETE RYQKGEISLC  180
RVYKRAGVED HPSLPRSLPP SRAAANANGA STSRPVLAQS SSSSTLDKKQ HSINSSLMEK  240
LQSNFNFSGG PLGQSVQQLH RHHQDQVPAD QKINETEGSS GNSDVTSTIG VGLRSSSAPN  300
IPPIHHSSSS LGHHHQGGVL QLDDQAEQEG ISTFLQQHHH HHHSKQQTML FAGGPGSSVS  360
STSNAIEDLQ RLLNYQQQQA VSNIVNHQQA LHVQQQYYDA HSHHQHHVPS NNVVNHFSTA  420
NFPLVSPQSQ PSPNGLPITA FSDRLWEWNP ISEANRAPDQ YTTNPFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.11e-109NAC family protein