PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro05_G19116 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | NAC | ||||||||
Protein Properties | Length: 467aa MW: 52676.1 Da PI: 7.3151 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 159.6 | 1.2e-49 | 39 | 164 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 +pGfrFhPt+eel+ +yL++kvegk++++ e i+ +d+y+++Pw+Lp++++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + s++ + Ro05_G19116 39 MPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPAMAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSENFRS 135 79***************************.89***************888889********************************************* PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +glkktLvfy+g+apkg +t+W+m+eyrl Ro05_G19116 136 IGLKKTLVFYSGKAPKGIRTSWIMNEYRL 164 ***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 467 aa Download sequence |
MAIAATSRMS HEEDDSNNQN IKQGSHDADA DDHEHDMVMP GFRFHPTEEE LIEFYLRRKV 60 EGKRFNVELI TFLDLYRYDP WELPAMAAIG EKEWFFYVPR DRKYRNGDRP NRVTTSGYWK 120 ATGADRMIRS ENFRSIGLKK TLVFYSGKAP KGIRTSWIMN EYRLPHHETE RYQKGEISLC 180 RVYKRAGVED HPSLPRSLPP SRAAANANGA STSRPVLAQS SSSSTLDKKQ HSINSSLMEK 240 LQSNFNFSGG PLGQSVQQLH RHHQDQVPAD QKINETEGSS GNSDVTSTIG VGLRSSSAPN 300 IPPIHHSSSS LGHHHQGGVL QLDDQAEQEG ISTFLQQHHH HHHSKQQTML FAGGPGSSVS 360 STSNAIEDLQ RLLNYQQQQA VSNIVNHQQA LHVQQQYYDA HSHHQHHVPS NNVVNHFSTA 420 NFPLVSPQSQ PSPNGLPITA FSDRLWEWNP ISEANRAPDQ YTTNPFK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02450.1 | 1e-109 | NAC family protein |