PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro05_G13822
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family G2-like
Protein Properties Length: 419aa    MW: 47155.9 Da    PI: 7.8603
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro05_G13822genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.84.4e-32232285255
      G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                  pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  Ro05_G13822 232 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 285
                  9****************************************************7 PP

2Myb_DNA-binding48.32.2e-15233284148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+rWTt ++ ++v+av++lGg+   t+k++ + m  k +tl ++ks++q+y+
      Ro05_G13822 233 RMRWTTTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 284
                      89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    
MELFPAQPDL SLQISPPNTK PTSSGSWRRS ADEEEAADVD LGFWKRALDS RNSSISSDTF  60
SDLSLSNPTR LSHDQYSNTN RINHFHHQNH FGLQNGHNGN TNGLLFHAFQ QNQFLNPQHQ  120
LHHQRIFEQQ HQHQQEQQGG YLGPELGFLR PIRGIPVYQN PPPPNPHHHH HHHPPPNLFP  180
FSSQNIKPNL NLDTTATSLT SSNSTLSSPS SNPFLRSRFL SRFPAKRSMR APRMRWTTTL  240
HARFVHAVEL LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTVKTTD KAAATSGQSE  300
LYENASSGDT TEDIMFDNIN QNPTRSSEQG RPNHAQDKEY YGGLWSNSSS REAWLHGNKT  360
KDSAGNMPSL LDHEKDMMDP KGLSSYERIS DVSSSTNHSG TSPMKPNLEF TLGRGGHTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.12e-68G2-like family protein