PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ro05_G13372

Organism

Rubus occidentalis

Taxonomic ID

75079

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus

Family

bZIP

Protein Properties

Length: 290aa MW: 31542.2 Da PI: 5.88

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ro05_G13372	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	44.1	4.4e-14	196	250	4	57
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkeva 57 +++rr++kNRe+A rsR+RK+a++ eLe v +Le+eN +L ++e+e+ k+ + Ro05_G13372 196 QQKQRRMIKNRESAARSRERKQAYTVELESLVTQLEEENARLmREEAEQKKERFK 250 689*************************************983555555555444 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MASSKLVVVS TANSDLPRDS SICSLSSLIA DVDKQQALTM DDLLKNIYND HSHPSPSMDG 60 GASASAAAPG RTVEEVWKEI VAGGGGGGGA EGEDEAEGGA DQVRPGTGDG GGGVEEMTLE 120 DFLTRAGAVR EEDVGVAGGL VPIEYSQFQV QPQPQPPPPP QPQGQLVVYA NNNNGTSGRG 180 TKRRAVQDAP LDKATQQKQR RMIKNRESAA RSRERKQAYT VELESLVTQL EEENARLMRE 240 EAEQKKERFK RLMENLIPVV EKRRPPRVLR RVQSVHWIIP KTNPYSAPQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44080.1	3e-35	bZIP family protein