PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro05_G08626
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family WRKY
Protein Properties Length: 311aa    MW: 34817.5 Da    PI: 9.4575
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro05_G08626genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.61.7e-30243300359
                  -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  D y+WrKYGqK++kgs++prsYY+C+s  gCp++k+ver+ ed +++++tY g+H+h+
  Ro05_G08626 243 DDYSWRKYGQKPIKGSPYPRSYYKCSSVrGCPARKHVERCLEDSTMLVVTYDGDHQHS 300
                  99************************988****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MEKNSGDFLS MNPGLDFKVH QVAKTSLQHA HHLFACISDN NQERSVQEVS LIAEDAVKEF  60
RKLLKLLDGS MSSNHRRIRK GPLPKSHHVN QVDLMEISPN SCSSQTSTYD WAHQPFLVKQ  120
FNSTLQRDQA IASCDQSSVA LPSLIMGLNQ FSQNPSCTSL ISMAGSSIHT QIVRHSTSEL  180
TFRDGTSMFS SKRKSCGVKS EEDGTICLAS TGGCHCSKRR KLRIKRRIRV PAVSNKLADI  240
PPDDYSWRKY GQKPIKGSPY PRSYYKCSSV RGCPARKHVE RCLEDSTMLV VTYDGDHQHS  300
NFTFQAPALL N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1223229RIKRRIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23320.15e-49WRKY family protein