PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro05_G03654
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family G2-like
Protein Properties Length: 463aa    MW: 50816.2 Da    PI: 7.3729
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro05_G03654genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.65.1e-32272325255
      G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                  pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  Ro05_G03654 272 PRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 325
                  9****************************************************7 PP

2Myb_DNA-binding46.77.2e-15273324148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+rWT  ++ ++v+av++lGg+   t+k++ + m  k +tl ++ks++q+y+
      Ro05_G03654 273 RMRWTSSLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 324
                      89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 463 aa     Download sequence    
MPHKGILESL NPIPDLSLHI SPPNSCPNSS SLCCTTTDSA AFNIWRCRDN NNVLDGGLVK  60
SHSSVDDAAA TPLAADTQLS LAANPTSASE AESDNSWRMK SSYFKRDQQQ AATEKHNISH  120
GLSMLDVAEL GIKPIKGIPV YNTTPAANCS FPFSSPNLDS SRDSAAANSK LCFYQQTPSY  180
LSPAAPFRPM GVGGGFESRF NGITMDSLRV PQHGHLQQYL NHHQQQHQHQ CGVGVGIGAH  240
HHHPDFSNNN GFMMRSRFTP KSYHSKRNMR APRMRWTSSL HARFVHAVEL LGGHERATPK  300
SVLELMDVKD LTLAHVKSHL QMYRTVKNTD KPVASSDGSG DEDLLSTTTT THHQNSTNNS  360
LLNQRGASNA TLNLEHDMEH HPSSNLWGNS SSRGAWVQAS SRDLNGLSQD RSPSGNPFHH  420
HEGSDFAQSR SSFVDVSNVD LIKNPSLEFS LGRPDWHSKE VLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16560.13e-47G2-like family protein