PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro05_G03654 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | G2-like | ||||||||
Protein Properties | Length: 463aa MW: 50816.2 Da PI: 7.3729 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 101.6 | 5.1e-32 | 272 | 325 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ Ro05_G03654 272 PRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 325 9****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 46.7 | 7.2e-15 | 273 | 324 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ Ro05_G03654 273 RMRWTSSLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 324 89************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 463 aa Download sequence |
MPHKGILESL NPIPDLSLHI SPPNSCPNSS SLCCTTTDSA AFNIWRCRDN NNVLDGGLVK 60 SHSSVDDAAA TPLAADTQLS LAANPTSASE AESDNSWRMK SSYFKRDQQQ AATEKHNISH 120 GLSMLDVAEL GIKPIKGIPV YNTTPAANCS FPFSSPNLDS SRDSAAANSK LCFYQQTPSY 180 LSPAAPFRPM GVGGGFESRF NGITMDSLRV PQHGHLQQYL NHHQQQHQHQ CGVGVGIGAH 240 HHHPDFSNNN GFMMRSRFTP KSYHSKRNMR APRMRWTSSL HARFVHAVEL LGGHERATPK 300 SVLELMDVKD LTLAHVKSHL QMYRTVKNTD KPVASSDGSG DEDLLSTTTT THHQNSTNNS 360 LLNQRGASNA TLNLEHDMEH HPSSNLWGNS SSRGAWVQAS SRDLNGLSQD RSPSGNPFHH 420 HEGSDFAQSR SSFVDVSNVD LIKNPSLEFS LGRPDWHSKE VLD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16560.1 | 3e-47 | G2-like family protein |