PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro05_G03424 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | ERF | ||||||||
Protein Properties | Length: 217aa MW: 24459.3 Da PI: 8.2455 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.8 | 1.9e-16 | 40 | 88 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + GVr+++ +grWvAeI+d s+ + r +lg+f+ aeeAa a+++a++ l+g Ro05_G03424 40 FLGVRQRP-SGRWVAEIKDSSQ---NLRLWLGTFDRAEEAALAYDKAARLLRG 88 67******.7*********543...5***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MDSLESSSTP NQKETLRENK ENGCTAIKVP KKAKIDGRRF LGVRQRPSGR WVAEIKDSSQ 60 NLRLWLGTFD RAEEAALAYD KAARLLRGRN AKTNFPPSHH DQQHGMTCFM NTHEENCSIL 120 RKNPRLYQLL QHAIMKNHAR SSTTIMGKGA QFDSVNDDFD TLVEETIVCS SSTSTASGVQ 180 DHDDHHCALS FGTSKLLLSV VRESSHDDQR EKKGYQE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 5e-16 | ERF family protein |