PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro05_G01881 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | NAC | ||||||||
Protein Properties | Length: 190aa MW: 21144.6 Da PI: 7.7663 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 158.8 | 2.2e-49 | 14 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 lppGfrF+Ptdeelv +yL+ kv + +l++ ++i+e++++ ++PwdLp e+e yfFs++++ky++g+r+nr+t+sgyWkatg+dk+++s+ ++ Ro05_G01881 14 LPPGFRFQPTDEELVFQYLRCKVFSCPLPA-SIIPEINVCLYDPWDLPGD---LEQERYFFSNKESKYPNGNRTNRVTSSGYWKATGSDKKIVSSrRN 107 79****************************.89***************54...46799**********************************998677 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + vg kk+Lvfy+g+ap+g+ktdWvmhey+l Ro05_G01881 108 NIVGKKKSLVFYRGKAPTGSKTDWVMHEYSL 138 78***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence |
MDKFNFVRNG MIRLPPGFRF QPTDEELVFQ YLRCKVFSCP LPASIIPEIN VCLYDPWDLP 60 GDLEQERYFF SNKESKYPNG NRTNRVTSSG YWKATGSDKK IVSSRRNNIV GKKKSLVFYR 120 GKAPTGSKTD WVMHEYSLVN NTGPTASSTE ITSTSPVSSS SSCSSCSGIT EVSSSHEAGD 180 DEEISGCTTF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 1e-73 | NAC family protein |