PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro05_G01782
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family NAC
Protein Properties Length: 1084aa    MW: 121087 Da    PI: 5.5195
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro05_G01782genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.79.2e-533594931127
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 
                  lp GfrF+Ptdeel+++yL+ k++g++ e+ +vi+e+d++k+ePwdLpk  ++k++++ew+fF++rd+ky++g+r+nrat++gyWkatgkd++++s+ 
  Ro05_G01782 359 LPLGFRFRPTDEELINHYLRLKINGRHSEV-QVIPEIDVCKWEPWDLPKlsMIKSDDQEWFFFCPRDRKYPNGHRSNRATDAGYWKATGKDRTIKSRq 455
                  699************************999.99***************5458899999**************************************98 PP

          NAM  96 ......kgelvglkktLvfykgrapkgektdWvmheyr 127
                        ++ lvg+kktLvfy+grapkge+t+W+mheyr
  Ro05_G01782 456 fksvsnNTGLVGMKKTLVFYRGRAPKGERTSWIMHEYR 493
                  8777666666***************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1084 aa     Download sequence    
MSNNNDCELP DLEKQQCHSG AEAVSSIPDS RLEDTVPAVP LLNVVVSEPP TSTSNLSKEV  60
PSPQKGHHSR TSSSHEQCRV CQQDKDEALI DLGCHCRGGL AKAHRSCIDT WFRTKGSNKC  120
EICQGVAANV SSPESQPTTN YWVWRIETTF RSQNQDRGCM SPLWVAFSIL IGGLLLDVLI  180
SATLGISAVP VNIIIGVIVV LGLGTILRLA LSFCHEWSSR RVAQRVRTNV QNVPVGYHTV  240
YSTVITRTRV HTLATWSELG LRRRDRLQRI HVESTASSQS KAGHRLQSIK VKASSSLIEE  300
ETAHVPSFQE EKERREEKTQ LPNCHSRPNQ AEAGVRAEEE EEDQRPLRAQ MAVLSMESLP  360
LGFRFRPTDE ELINHYLRLK INGRHSEVQV IPEIDVCKWE PWDLPKLSMI KSDDQEWFFF  420
CPRDRKYPNG HRSNRATDAG YWKATGKDRT IKSRQFKSVS NNTGLVGMKK TLVFYRGRAP  480
KGERTSWIMH EYRPTQKELD GTAPGQCAFV LCRLFHKPEE KAEVLKYDEV EQTGLSPTNS  540
PDEASSDIVQ ETATPDMKGG KQSEGISRWL NDNSDHMTPD ALTVPPVDSY MASDVEDHGP  600
EETTIWGHHH LPGENLGFYE PTGDQIDCKV FSPSHSQFNA ELDYVGSPFP SDFGNYNNGL  660
HFQDGTCEQD VSLTELLDGV CNNHYESSCE ESTSQKNLVV DSETYLSDHA FMLQAMPPEN  720
SWLNGSFGDT DAKVAQHNLE MRAPGLSNEQ FDPEDLLQKT SFGSHQAEAS ALLHDQKPRT  780
GNMGYPSNSF ADSAVNSVYH MSNNLDGSTS WQNVDNHSID QVGGPSIKIR SRLSQERPNL  840
NVMNQGSAQR RIRLLLDNHT RHSNHNKEED EVQSTITEAR DAVPESLTSD EEKEVHAMFD  900
KEEEVTSRNY SINNERDLVG RTAITRKVRQ SQEPSDSDKS ITQGMAPRRI RLAMNSSPVS  960
VADGNARDTS HGQEDEVQSS IIEASEASEK SPNLNEQDVE CHPWKLEEPS TTVIDESKKT  1020
TEEAVTTKFR SRTGSDNSLQ SNHMGMSVPS KTPSKHYGPT SALIISVGIP LLLTTTWSVA  1080
ECDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.11e-130NAC family protein