PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro04_G36928 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | GATA | ||||||||
Protein Properties | Length: 197aa MW: 22150.4 Da PI: 9.8288 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 48.9 | 9.1e-16 | 114 | 146 | 1 | 33 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkk 33 C++Cg t+Tp+WR+gp g tLCnaCG++y+ Ro04_G36928 114 CTHCGITQTPQWRHGPLGRMTLCNACGVRYKCG 146 ******************************965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MALHGPDEFL ADVSEDRDYP GLLVPATVKL AKEEELEWQS NKDAFHAVET RMLSNAQQQN 60 HRVSASVVEA GIDKSLLRSM PARKCKKNSA QVKNKPGRLC PEDSAKVKRI ERECTHCGIT 120 QTPQWRHGPL GRMTLCNACG VRYKCGRLCP EYRPANSPTF SGKLHSNAHR KVMEMRKQKY 180 GTVSKPVNIW MPSYASS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34680.2 | 2e-34 | GATA family protein |