PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro04_G36174 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | NAC | ||||||||
Protein Properties | Length: 242aa MW: 27565 Da PI: 7.0549 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 176.8 | 5.9e-55 | 9 | 134 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 lppGfrFhPtdeel+v+yLk++++++++++ ++i+evdiyk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nrat sgyWkatg+dk+++s +++ Ro04_G36174 9 LPPGFRFHPTDEELIVYYLKNQATSRPCPV-SIIPEVDIYKFDPWQLPEKAEFGENEWYFFSPRDRKYPNGVRPNRATVSGYWKATGTDKAIHS-GSK 104 79****************************.89***************99999*****************************************.99* PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 vg+kk Lvfykgr pkg ktdW+mheyrl Ro04_G36174 105 YVGVKKALVFYKGRPPKGIKTDWIMHEYRL 134 ****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MEANGSSGLP PGFRFHPTDE ELIVYYLKNQ ATSRPCPVSI IPEVDIYKFD PWQLPEKAEF 60 GENEWYFFSP RDRKYPNGVR PNRATVSGYW KATGTDKAIH SGSKYVGVKK ALVFYKGRPP 120 KGIKTDWIMH EYRLTANDVK EEQMLNFPRT CSISSLLDMD YLGPISQLLN DNSTYDFHNM 180 LATSAGLGSV QTFQFGDQQN QIPYQSTDSA KFQVMMNQTS SPFMNQPLFV NPAYNNMNGL 240 NH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 8e-91 | NAC family protein |