PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro04_G23119 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | NAC | ||||||||
Protein Properties | Length: 253aa MW: 28632.4 Da PI: 9.3547 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 162.1 | 2.1e-50 | 14 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 lppGfrFhPtdeelv +yLk+kv + +l++ ++i+ev+++k++PwdLp e+e yfFs+r+ ky++g+r+nrat sgyWkatg dk+++++ ++ Ro04_G23119 14 LPPGFRFHPTDEELVLQYLKRKVFSCPLPA-SIIPEVEVCKADPWDLPGD---LEQERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIVASrGN 107 79****************************.89***************54...46799**********************************998577 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 ++vg+kktLvfy g+ p+g +tdW+mheyrl Ro04_G23119 108 QVVGMKKTLVFYGGKPPHGARTDWIMHEYRL 138 78***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MEKLNFVRNG ELRLPPGFRF HPTDEELVLQ YLKRKVFSCP LPASIIPEVE VCKADPWDLP 60 GDLEQERYFF STREAKYPNG NRSNRATGSG YWKATGLDKQ IVASRGNQVV GMKKTLVFYG 120 GKPPHGARTD WIMHEYRLVL AEDKNKSSQS PVAPPVNNWV LCRIFLKKRG SGKNEEEQVQ 180 GQPCNVDQRV AKKPRISRPV FYDFMTKDRA NLSLAPCSSS SGSSGVTDVV SSETEEHEES 240 SSCNSLPYFR RKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 2e-99 | NAC family protein |