PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro04_G11404 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | NAC | ||||||||
Protein Properties | Length: 144aa MW: 16523.8 Da PI: 7.4933 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 72.5 | 1.1e-22 | 47 | 128 | 1 | 82 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgy 82 lppG+rF+P d elvv+yLk+k++++ l+ + i+ev++y++ P +L ++++ +e wyfF++r+kkya+g r++r++ +gy Ro04_G11404 47 LPPGYRFKPFDTELVVYYLKRKIANQILPP-NRIREVELYNFSPDTLAEQYEDvDEGAWYFFTPREKKYANGARPRRSAGDGY 128 79*************************999.77**************96555525559*******************999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 144 aa Download sequence |
MKISFDTIPD SQRARIENCS EAAIVTNNGS DLHGGHLGSY DSFFSTLPPG YRFKPFDTEL 60 VVYYLKRKIA NQILPPNRIR EVELYNFSPD TLAEQYEDVD EGAWYFFTPR EKKYANGARP 120 RRSAGDGYIG KLLGLIRMLY IIML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 9e-25 | NAC family protein |