PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro04_G02787 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | TALE | ||||||||
Protein Properties | Length: 316aa MW: 36217.9 Da PI: 4.841 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 29.4 | 1.4e-09 | 259 | 293 | 21 | 55 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yp+++++ LA+++gL++rq+ +WF N+R ++ Ro04_G02787 259 KWPYPTEADKIALAESTGLDQRQINNWFINQRKRH 293 569*****************************885 PP | |||||||
2 | ELK | 26.8 | 1.2e-09 | 213 | 234 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 +LK++Llr +++++g+Lk EFs Ro04_G02787 213 DLKDRLLRRFGSHIGTLKLEFS 234 69*******************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence |
MEEMYGLQPT VDYSDKALMS PENLILPMDY QSLLSSGAFR DHRVPMTFGS DVADLYSVIP 60 TAPEFRRGEE DVFGFIKAKI ASHPSYPRLI EAFIDCQKVG APPEIASFLE EIRRENDLYK 120 RDRDAANVIS TCIGADPELD EFMETYCEML VKYKSDLSRP FDEATTFLNK IETQLSNLCI 180 RSLSDEGAVS SEEELSGGEL EVQEAQARGE DRDLKDRLLR RFGSHIGTLK LEFSKKKKKG 240 KLPKEARQAL LHWWSVHYKW PYPTEADKIA LAESTGLDQR QINNWFINQR KRHWRPSENM 300 QFALMDNLSG PFSADD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G23380.1 | 1e-114 | TALE family protein |