PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ro04_G00057

Organism

Rubus occidentalis

Taxonomic ID

75079

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus

Family

G2-like

Protein Properties

Length: 316aa MW: 35207.5 Da PI: 7.4752

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ro04_G00057	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	42.3	1.7e-13	20	50	1	34
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktile 34 kprl+WtpeLH+rFveav+qLG +AtPk++++ Ro04_G00057 20 KPRLKWTPELHQRFVEAVNQLG---EATPKSLMR 50 79*****************4...79**997 PP
2	Myb_DNA-binding	38.6	2.5e-12	22	58	1	37
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-H CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtl 37 r++WT+e+++++v+av+qlG t+k+ +r+ +g++ Ro04_G00057 22 RLKWTPELHQRFVEAVNQLGEATPKSLMRKYRLGKSQ 58 89****************************9998875 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MGLQNMQNQN MNLVLSTDAK PRLKWTPELH QRFVEAVNQL GEATPKSLMR KYRLGKSQQS 60 ENCSDSLQED HKEIQSSDGH FCTDINDENR SQINESAQIA RSLQMQMEVQ RKLHEQIEVQ 120 RHLQLRIEAQ GKYLQSVLKK AQETLSGYNS SSVGVELAKA EISQLVSMVN NGCPSSSFSE 180 LTETGTPTLK DIERKQIRGT ICSMESSLTS SESSGRKEEK SNPTCVELPL MEIHPEVKPL 240 NNVTGNQNHG IGRKRNISSS ISDGICVVQP ISKRSSATQR DKSGNHLRLA TIDLNCNYQN 300 DIDSGPKALD LNCKGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69580.1	2e-70	G2-like family protein