PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro03_G32898
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family NAC
Protein Properties Length: 247aa    MW: 29289.9 Da    PI: 6.6564
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro03_G32898genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM84.22.5e-2691383128
          NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                  +G+rF+P  e+l+v+yL++k+eg+ ++    ++++d+y   ePw++ +      + ++e+k++yf ++++kk+++g+r +r++ sg+Wk    +k+vl
  Ro03_G32898   9 VGYRFRPDIEQLLVHYLRPKLEGQAFPK-GPVHNCDLYGNqEPWQIWEafkeslEKDQERKDLYFITQHKKKTPKGSRISRTVGSGTWKGDDASKKVL 105
                  7************************999.88******96549****64345543333355588*********************************** PP

          NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                  +++++++g +k + +   ++ + ++ +W+mhey+l
  Ro03_G32898 106 AASRRVIGKRKRFHYE--NKGSVQNGRWIMHEYEL 138
                  *9*********99987..55556789*******98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MAVHDDPVVG YRFRPDIEQL LVHYLRPKLE GQAFPKGPVH NCDLYGNQEP WQIWEAFKES  60
LEKDQERKDL YFITQHKKKT PKGSRISRTV GSGTWKGDDA SKKVLAASRR VIGKRKRFHY  120
ENKGSVQNGR WIMHEYELDA SLLRNKHQAK KKNDKSEKDQ KLEEQENQEE DMMSCDYGDQ  180
QDGDHHDEPE FVEEETVMTR DNFRKHVLDF EVYLKKLIAE QAMKKNDHKD SQKMILEELE  240
RHMMSDD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1114155KRKRFHYENKGSVQNGRWIMHEYELDASLLRNKHQAKKKNDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36160.12e-18NAC family protein