PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro03_G32847 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | NAC | ||||||||
Protein Properties | Length: 174aa MW: 20694.6 Da PI: 9.5301 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 66.4 | 8.1e-21 | 11 | 134 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 +p+GfrF+P++eel+++yL+ k++g++++ ++++++y ePw+ + +++e+ke+yfF+ + kk + + + +r + +g+W+ + k+v+ Ro03_G32847 11 VPVGFRFRPNEEELLCYYLRSKINGERFPN-GLVHNCNVYGDqEPWHVWEaykdPLDQETKELYFFTDQPKKMR-SIKIRR-VGTGTWRGENTGKKVH 105 599************************999.89*****996549****742344344477799*****999875.455555.688****999999*99 PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++lvg++ +++ ++ + + +W+mhe +l Ro03_G32847 106 A--SNLVGTR--FMY--KKPGSVQDGRWLMHELEL 134 8..7889987..444..466777899******876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MAVLMQGDHH VPVGFRFRPN EEELLCYYLR SKINGERFPN GLVHNCNVYG DQEPWHVWEA 60 YKDPLDQETK ELYFFTDQPK KMRSIKIRRV GTGTWRGENT GKKVHASNLV GTRFMYKKPG 120 SVQDGRWLMH ELELDESLIH SKDQVKEKRY VLCILRKIEE KKDRKRSGRD EWGQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46770.1 | 6e-15 | NAC family protein |