PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ro03_G27656

Organism

Rubus occidentalis

Taxonomic ID

75079

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus

Family

BES1

Protein Properties

Length: 360aa MW: 38889.6 Da PI: 8.3811

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ro03_G27656	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	204	4.3e-63	3	144	2	149
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslk 99 +++r p+wkErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+ve DGttyrkg+kp e+++++ s+ asp+ss++ Ro03_G27656 3 TGTRLPSWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVELDGTTYRKGCKPVERMDMVDGSTAASPCSSYH---- 96 789*****************************************************************************************.... PP DUF822 100 ssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsss 149 +s +sy++sp sssfpsp+s++ + +++ +sl+p+l++ls+ sss Ro03_G27656 97 ----PSNYASYNPSPGSSSFPSPASSSYAANQNVdgSSLIPWLKHLSSGSSS 144 ....999***********99887776665567*******9996655 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MTTGTRLPSW KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCNEAG 60 WTVELDGTTY RKGCKPVERM DMVDGSTAAS PCSSYHPSNY ASYNPSPGSS SFPSPASSSY 120 AANQNVDGSS LIPWLKHLSS GSSSVSSSKI PNLYIHGGSI SAPVTPPLSS PTARTPRMNT 180 DWDEQSAQPG WGGQQHYSFL PSSTPPSPGR QIVPGPEWFS GIRIPHGPTS PTFSLVSSNP 240 FGFKEEALAG GGSRMWTPGQ SGTCSPAIAA GFDHTADIPM SEVISEEFAF GSCNTAGLVK 300 AWEGERIHEE CGSDDLELTL GCSKTSRKKE SLYIETAAAA LALPLKIKRY VSLNLLFTIF

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MTTGTRLPSW KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WTVELDGTTY RKGCKPVERM DMVDGSTAAS PCSSYHPSNY ASYNPSPGSS SFPSPASSSY  120
AANQNVDGSS LIPWLKHLSS GSSSVSSSKI PNLYIHGGSI SAPVTPPLSS PTARTPRMNT  180
DWDEQSAQPG WGGQQHYSFL PSSTPPSPGR QIVPGPEWFS GIRIPHGPTS PTFSLVSSNP  240
FGFKEEALAG GGSRMWTPGQ SGTCSPAIAA GFDHTADIPM SEVISEEFAF GSCNTAGLVK  300
AWEGERIHEE CGSDDLELTL GCSKTSRKKE SLYIETAAAA LALPLKIKRY VSLNLLFTIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	1e-119	BES1 family protein