PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Ro03_G18133 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 253aa MW: 28305.8 Da PI: 9.3461 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 90.3 | 1.8e-28 | 79 | 134 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmk..vkgLtlehvkSHLQkYRl 55 prlrWtp+LH++F++av++LGG++ AtPk+il++m+ kg+t++h+kSHLQ+YR+ Ro03_G18133 79 PRLRWTPDLHRCFMHAVDRLGGEDGATPKRILQIMNanYKGITITHIKSHLQMYRS 134 8**********************************73368***************7 PP | |||||||
2 | Myb_DNA-binding | 44.1 | 4.8e-14 | 80 | 133 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg...kgRtlkqcksrwqkyl 48 r+rWT++++ + +av +lGg+ t+k+I + m+ kg t ++ks++q+y+ Ro03_G18133 80 RLRWTPDLHRCFMHAVDRLGGEdgaTPKRILQIMNanyKGITITHIKSHLQMYR 133 89**************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 253 aa Download sequence |
MAMKRVELGE GSFLSSLENG AQLQCTTSHF PSYDAHDRRI EPQQTGVHRA NLPAERMIMP 60 RPTGLLTTTS RPYVRSRVPR LRWTPDLHRC FMHAVDRLGG EDGATPKRIL QIMNANYKGI 120 TITHIKSHLQ MYRSMKHEER IEEAAARAKV NEKGKASCSN DSYLPESINR SADRHWKDEK 180 KPRAYLIFTD LFRNISKDDQ GNIEGNIKGG GAIDATSSLS LNSSSNAYNS QGFKLSEAGT 240 SDVNDVSIEL TLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G02060.1 | 2e-27 | G2-like family protein |