PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro03_G17042 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | G2-like | ||||||||
Protein Properties | Length: 424aa MW: 46593.8 Da PI: 8.6208 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 94.8 | 6.8e-30 | 152 | 205 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prl+Wtp+LH+rFv++v++L G+++A+Pkti+++m+v+gLt+e+v+SHLQkYRl Ro03_G17042 152 RPRLVWTPQLHKRFVDVVAHL-GIKNAVPKTIMQMMNVEGLTRENVASHLQKYRL 205 59*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 48.6 | 1.9e-15 | 154 | 204 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+++++++vd+v+ lG + +ktI+++m+ +g+t++++ s++qky+ Ro03_G17042 154 RLVWTPQLHKRFVDVVAHLGIKnaVPKTIMQMMNvEGLTRENVASHLQKYR 204 789*******************9***************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 424 aa Download sequence |
MGEEVRMSEY EGGGSGGDGD EERVLEWEAG LPTVDDLTPL SQPLIPVELA SAFSISPEPC 60 RTVVDVNRAS QKTVSTLRGS HSQGYSSNYK SLEGGGDEPM VAEVDETEPY GGAGSDSRKS 120 RKVDSPEEAD SALRIENSGG GGDDPSSRTV KRPRLVWTPQ LHKRFVDVVA HLGIKNAVPK 180 TIMQMMNVEG LTRENVASHL QKYRLYLKRM QGLSNEGPSS SDHLFASTPV PQSLHESGAS 240 GSGHGNGHMI PMPYPPGPMM PMPTYMRMPG GYHGFESHPS YNMMQQHKYD CSEKLERDVI 300 GRVVAPAATA ISAELLISTV AECPHNYSSI APVIIFINWL PRLSSPTNKK QPQKPHISRV 360 CCSKPLTASD YYQNSNHQRS RKCRNSKFRR VAPAKKVEKK KLRNKLMLRC LIPGDLPSLR 420 VSSE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G46640.3 | 4e-78 | G2-like family protein |