PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro03_G16037
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family NAC
Protein Properties Length: 342aa    MW: 37947.4 Da    PI: 8.2242
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro03_G16037genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM172.41.4e-53181501128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk... 95 
                  lppGfrFhPtdeelvv+yLkkk+++ +l++  +i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+vls+   
  Ro03_G16037  18 LPPGFRFHPTDEELVVHYLKKKASSAPLPV-AIIAEVDLYKFDPWQLPEKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLSTtdd 114
                  79****************************.88***************988899****************************************9999 PP

          NAM  96 ...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++++vg+kk Lvfy+g+ pkg kt+W+mheyrl
  Ro03_G16037 115 gggGSRKVGVKKALVFYRGKPPKGIKTNWIMHEYRL 150
                  9888888***************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MESTDSSTGS QPPPQPNLPP GFRFHPTDEE LVVHYLKKKA SSAPLPVAII AEVDLYKFDP  60
WQLPEKATFG EQEWYFFSPR DRKYPNGARP NRAATSGYWK ATGTDKPVLS TTDDGGGGSR  120
KVGVKKALVF YRGKPPKGIK TNWIMHEYRL IDNNTSNKPP GCHDLGNKKN SLRLDDWVLC  180
RIYKKNNTHR PMDQEDSMDD GLGSSFPLSK LHHLPPKSTT ASYAQFLDND HNFFDGMVSN  240
DGINSSGSFV PNVALANSSH PLKRGLPNLY WNDQEDEAGP SRRLQLDNSD STGNGSIATL  300
LSHLPQTPPP LHQQPMLGVS QLGGDGLFRG TPYQLPGMNW YS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15510.11e-111NAC family protein