PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro03_G13495
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family WRKY
Protein Properties Length: 570aa    MW: 61800.3 Da    PI: 7.3599
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro03_G13495genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.11.1e-30314372259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                   Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
  Ro03_G13495 314 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAiGCPVRKQVQRCAEDRTILITTYEGNHNHP 372
                  7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 570 aa     Download sequence    
MDKGWGLTLD SDSLGFFLNK PPPTSAVNNK RTNPFAGERM FTGIEFPVKP RPADDSRVAV  60
DEVDFFSDKN NKDDHREQEL KSNNNNTSIS VKKENWSGLD AVNTGLHLVT ANTGSDQSTV  120
DDGVSSDHAD NRRAKNHELA QLQVDLQRMN AENQRLKEML GQVTNNYNAL QMHLVAVVQQ  180
QQQNQAAADQ TSQDHDQNVE GKSEEKRHEI GSSGALVPRQ FLNLGPREET KTDNEVSNSS  240
SEARTRSASP QNNVSTNGKR VGREESPESE TQGWVPNKVP KLNSPPKPID QATEATMRKA  300
RVSVRARSEA PMITDGCQWR KYGQKMAKGN PCPRAYYRCT MAIGCPVRKQ VQRCAEDRTI  360
LITTYEGNHN HPLPPAAMAM ASTTTAAASM LLSGSMSSAD GIMNPNNLLA RAILPCSSSV  420
ATISASAPFP TVTLDLTTTP PLQFQRPQQS QFQVPFPGQP QNFGSSASNP QLPPVFGQSL  480
YNQSKFSGLQ LSQELMNSSQ LAHQGQQQHS QPSSFADTVS AITADPTFTA ALAAAITSII  540
GGSSHPNNNS SSTSNNSNGA NNKIISFPGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-125WRKY family protein