PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro03_G05779
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family NAC
Protein Properties Length: 317aa    MW: 36732.2 Da    PI: 8.0752
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro03_G05779genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM174.14e-54111411129
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                  +ppGfrFhPtdeel+ +yL+kkv+ + ++l +vi+evd++k+ePwdL++  ++ +  ++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+++ +
  Ro03_G05779  11 VPPGFRFHPTDEELLYYYLRKKVSYEAIDL-DVIREVDLNKLEPWDLKEkcRIGSgPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIHLS 107
                  69****************************.9***************952444443456*************************************** PP

          NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrle 129
                  +++ +g++ktLvfy+grap+g+ktdW+mheyrle
  Ro03_G05779 108 DSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRLE 141
                  ********************************85 PP

Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MMSAGNGQLT VPPGFRFHPT DEELLYYYLR KKVSYEAIDL DVIREVDLNK LEPWDLKEKC  60
RIGSGPQNEW YFFSHKDKKY PTGTRTNRAT TAGFWKATGR DKAIHLSDSK RIGMRKTLVF  120
YTGRAPHGQK TDWIMHEYRL EDHHDNINVH EVQEDGWVVC RVFKKKNHIN RGFQPEFGHH  180
QEVEHDLITH MKASGSGHNQ VVLDHHHHHH HHQPKQNHHH HLEASLYDYP STFDGTMHLP  240
QLFSPESAAV AAANSSSFVS APNNNMSALN PMDLESSSCG CRNRYYFNHA EIIPISVPWL  300
QRINYSCRHF KVLQVAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79580.11e-95NAC family protein